Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCAAGATGAATTTGGAGGGCACTTCAGGTGG
((((((..((((((((((((((&))))))))..........))))))..))...)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351307
GeneSymbolDUXB
Binding site33,69
Score0.923
Seed0
Au0.574
Energy-20.1
Binding len36
Me-7.795
Phylopstem-0.03421005833333333
Phylopflank0.2512988651630434
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end8
Position5UTR
2D Structure