Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTGTTGCTGGAGCTGCAC
.(((((((.((((....((((&))))...)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375701
GeneSymbolCLASP2
Binding site1310,1330
Score0.846
Seed1
Au0.618
Energy-20.9
Binding len20
Me-6.675
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure