Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAAGATTCTAGTTTTTATTTACCAGTGTGCCAGA
..(((((((((...((((((..&.))))))..))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001375820
GeneSymbolEMC1
Binding site4650,4687
Score0.846
Seed1
Au0.559
Energy-18.9
Binding len19
Me-10.45
Phylopstem5.908052111111112
Phylopflank4.313929452499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure