Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTATAGAGTATGCCAC
...((((((((..(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001375905
GeneSymbolSGMS2
Binding site4416,4432
Score0.846
Seed0
Au0.75
Energy-17.8
Binding len16
Me-11.15
Phylopstem4.428553875
Phylopflank3.7953086
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure