Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTACTGTATGCTAT
...(((((((((..((((((..&))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001375905
GeneSymbolSGMS2
Binding site5819,5835
Score1.0
Seed0
Au0.765
Energy-16.9
Binding len16
Me-8.661
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure