Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCCCATCGCAGCCGCC
..((.((((((((.(((.(((&))).)))..)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375969
GeneSymbolAFTPH
Binding site251,272
Score0.923
Seed0
Au0.397
Energy-20.5
Binding len21
Me-9.933
Phylopstem0.5505035875000001
Phylopflank0.29173854125
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
Position5UTR
2D Structure