Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCAGCAACTTCCAAAGGAGCAGTTGCT
..(((((((((((((((((((&)))))..)))))).........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375972
GeneSymbolAFTPH
Binding site2185,2216
Score0.923
Seed1
Au0.515
Energy-22.0
Binding len31
Me-4.957
Phylopstem1.4176375460000001
Phylopflank1.9255426573749999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure