Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGCCCGGAGGCGGCATGTGACGCGCGGCCGCAGCTGCC
..((((((((((((((.....&.)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001375982
GeneSymbolCHRM3
Binding site334,377
Score0.923
Seed1
Au0.206
Energy-28.2
Binding len16
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end3
Position5UTR
2D Structure