Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAGCCGAGCAGAACACGCAGATCACTTCAATTGCAAT
((((((((.((((((((((((&)))))))))))))))......................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376
GeneSymbolDYNC1H1
Binding site12288,12331
Score0.923
Seed1
Au0.485
Energy-24.7
Binding len43
Me-4.994
Phylopstem4.732340000000001
Phylopflank5.645301912500001
Longest consecutive pairings15
Position of longest consecutive pairings28
Pairings in 3prime end8
PositionCDS
2D Structure