Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCAGCGGCTGCAC
.(((((((((...((.((((.&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001330559
GeneSymbolL3MBTL4
Binding site330,346
Score1.0
Seed1
Au0.412
Energy-20.0
Binding len16
Me-11.487
Phylopstem-0.26935913333333333
Phylopflank-0.35917053749999994
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure