Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTGCCACAGTCCAGGAGCATTTGAAGGCACAGTGC
(((((((((((..((((((((.&))))).)))...))))))...........))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351351
GeneSymbolSPDYE17
Binding site1743,1778
Score0.846
Seed1
Au0.5
Energy-21.5
Binding len35
Me-8.574
Phylopstem0.18140857727272727
Phylopflank0.21499822624999998
Longest consecutive pairings6
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure