Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCAACCGCAGCCCCAGG
(((..((((((((((...(((&)))..))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351351
GeneSymbolSPDYE17
Binding site606,627
Score0.923
Seed0
Au0.382
Energy-22.8
Binding len21
Me-11.322
Phylopstem-0.05197822999999997
Phylopflank0.20441497187500007
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure