Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAATTGCAGCTC
....(((((((((((...(((&))).))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376025
GeneSymbolEPB41
Binding site488,504
Score0.923
Seed0
Au0.559
Energy-18.4
Binding len16
Me-9.78
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure