Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTTTACAACTGTGGTTTAGAGTTTGCT
..(((((((((((((((((((&))))))))))))))))........))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376056
GeneSymbolFUBP1
Binding site3509,3537
Score0.923
Seed1
Au0.706
Energy-21.2
Binding len28
Me-4.957
Phylopstem5.696325444444445
Phylopflank6.08601991325
Longest consecutive pairings16
Position of longest consecutive pairings12
Pairings in 3prime end8
Position3UTR
2D Structure