Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGACAAGTTGTAGAAAGATCAGCAACAGCAGCAGCAGCAGCAAC
((((.(((((.(((((.....&.))))).))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376131
GeneSymbolBTBD8
Binding site2188,2236
Score0.846
Seed0
Au0.588
Energy-20.1
Binding len18
Me-10.881
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings5
Position of longest consecutive pairings12
Pairings in 3prime end3
PositionCDS
2D Structure