Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAAGGCTGCAGGCTGCC
..((((((((((((...((((&))))...)))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351355
GeneSymbolTAPBPL
Binding site86,107
Score0.846
Seed1
Au0.412
Energy-22.7
Binding len21
Me-5.925
Phylopstem0.10292100000000003
Phylopflank-0.11284679999999998
Longest consecutive pairings8
Position of longest consecutive pairings6
Pairings in 3prime end5
Position5UTR
2D Structure