Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCCCCACCAGTAGCTGCT
..(((((((((((...(((((&)))))....))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376288
GeneSymbolPAK1
Binding site184,206
Score0.923
Seed1
Au0.412
Energy-22.0
Binding len22
Me-6.782
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure