Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTACATTAGGCCGGGTG
(((((((....(((((((....&)))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001376312
GeneSymbolGTDC1
Binding site3901,3918
Score0.846
Seed1
Au0.441
Energy-17.2
Binding len17
Me-11.375
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end4
Position3UTR
2D Structure