Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTATGGGCTGTAGCAGTACACTGAATTGTACTGTGCCAGGG
.(((((((((((((.(((....&.))).)))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001376360
GeneSymbolZC3H11A
Binding site5119,5162
Score0.923
Seed1
Au0.529
Energy-19.6
Binding len22
Me-4.529
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure