Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGCAGGGAGCTGGTGG
((((((((((((.((((((...&)))))).)))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351365
GeneSymbolNBPF19
Binding site3740,3760
Score1.0
Seed1
Au0.397
Energy-28.6
Binding len20
Me-5.227
Phylopstem0.13837675000000002
Phylopflank0.3041196573750001
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure