Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTTGACCGCAGGCTGCAC
.((((((((((((((.((((.&))))..))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376376
GeneSymbolCELF1
Binding site5793,5815
Score1.0
Seed1
Au0.441
Energy-25.8
Binding len22
Me-4.026
Phylopstem0.36896386000000003
Phylopflank0.4591017487499999
Longest consecutive pairings9
Position of longest consecutive pairings7
Pairings in 3prime end6
Position3UTR
2D Structure