Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGACAACTGCAGAATGTAGA
(((((.((((((((((..(((&)))..))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351372
GeneSymbolNBPF26
Binding site4821,4844
Score1.0
Seed0
Au0.529
Energy-23.0
Binding len23
Me-5.839
Phylopstem0.30077160000000003
Phylopflank-0.07372057500000001
Longest consecutive pairings10
Position of longest consecutive pairings8
Pairings in 3prime end6
Position3UTR
2D Structure