Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGAGGGTGGCAAAAGAGTGTTCTGGAGCTACAGACGGGGCCAGG
..(((((((((((((((((((.&)))))))))))..............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351377
GeneSymbolXIRP1
Binding site1586,1636
Score0.923
Seed1
Au0.456
Energy-29.7
Binding len50
Me-4.957
Phylopstem3.2692270204081653
Phylopflank2.9949610512500007
Longest consecutive pairings11
Position of longest consecutive pairings39
Pairings in 3prime end7
PositionCDS
2D Structure