Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGCCGCAGCTGCC
..((((((((((((.......&)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351377
GeneSymbolXIRP1
Binding site333,346
Score0.923
Seed1
Au0.368
Energy-24.3
Binding len13
Me-5.925
Phylopstem-0.4532975666666667
Phylopflank-0.2730278225
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure