Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCATATATACTAGCTGTT
..(((((((.(..((((.(((&))).))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376592
GeneSymbolIFI16
Binding site2398,2417
Score0.846
Seed1
Au0.588
Energy-15.9
Binding len19
Me-10.835
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure