Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTACTGACTGTAGCTT
....((((((((((((((((.&)))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376797
GeneSymbolHP1BP3
Binding site1797,1815
Score1.0
Seed0
Au0.691
Energy-19.8
Binding len18
Me-9.547
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure