Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACACTTGCACACCCCAGCTGTGAG
(((((((((.(((((((((((&)).)))))).))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376900
GeneSymbolPRDM9
Binding site2999,3023
Score0.846
Seed1
Au0.426
Energy-23.4
Binding len24
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure