Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACGCGACGAATACATAAAGCGGCTTGAGGAACTGCAGCTCGCC
..(((((((((((((((((((&))))))))...........................))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376908
GeneSymbolMTM1
Binding site1791,1839
Score0.923
Seed1
Au0.471
Energy-23.4
Binding len48
Me-4.957
Phylopstem1.2061194893617022
Phylopflank1.280283
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure