Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGTGGAGCTGCAGGAGCAAG
((((..((((((((.(((((.&)))))...))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001376932
GeneSymbolBPIFB3
Binding site39,62
Score0.846
Seed0
Au0.338
Energy-21.3
Binding len23
Me-10.693
Phylopstem0.5671302875
Phylopflank0.5840412876013513
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
Position5UTR
2D Structure