Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATGACTGGAGCTGGCAAC
((((((((.(((((((.((((&)))).))))))).))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001351486
GeneSymbolSLC8A1
Binding site1319,1342
Score1.0
Seed1
Au0.485
Energy-23.2
Binding len23
Me-4.994
Phylopstem0.4173296222222222
Phylopflank0.3527559721249999
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure