Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCGCCTCCTTCTACACCTCGCGCCGCCGCCGCGGCTCCTAGCGC
.(((((((((((((((.((((&.)))).))).....)))))))))....))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377144
GeneSymbolGABRA2
Binding site160,208
Score0.846
Seed1
Au0.294
Energy-21.8
Binding len31
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end7
Position5UTR
2D Structure