Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCAACAGCAGCTCAC
.((.((((((.((((((.(((&))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377237
GeneSymbolPLEKHA1
Binding site5177,5197
Score0.846
Seed0
Au0.544
Energy-22.2
Binding len20
Me-9.65
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure