Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCATTGTGTGTTCTCATTCGGGTG
((((((((((((((((......&))))))))))).......))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001377241
GeneSymbolPLEKHA1
Binding site1612,1636
Score0.846
Seed1
Au0.662
Energy-18.1
Binding len24
Me-3.938
Phylopstem0.7203186913043479
Phylopflank0.1018561995
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end2
Position3UTR
2D Structure