Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCATTGCGTGCTGAGGTG
(((((((((.((((((((....&)))))))).))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001377241
GeneSymbolPLEKHA1
Binding site12795,12815
Score1.0
Seed1
Au0.441
Energy-19.3
Binding len20
Me-5.18
Phylopstem0.032288300000000006
Phylopflank-0.08055589999999997
Longest consecutive pairings8
Position of longest consecutive pairings12
Pairings in 3prime end4
Position3UTR
2D Structure