Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATAATCGCAGCA
.....(((((((((((.((((&))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377241
GeneSymbolPLEKHA1
Binding site12644,12660
Score1.0
Seed0
Au0.456
Energy-21.6
Binding len16
Me-13.666
Phylopstem-0.17118337272727271
Phylopflank0.00023788875000003984
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure