Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATGCTGGTGCGCTGCAC
.((((((.(((.(.(((.(((&))).))).).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377274
GeneSymbolABCC9
Binding site6460,6480
Score1.0
Seed1
Au0.559
Energy-19.8
Binding len20
Me-10.311
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure