Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTCAGCCAAACTTGCAGCTCAGCAAA
(((((((((((((((.((((.&)))))))))......))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377280
GeneSymbolRAG1
Binding site873,901
Score0.846
Seed1
Au0.559
Energy-19.7
Binding len28
Me-4.171
Phylopstem1.2649067826086955
Phylopflank3.2734769025000006
Longest consecutive pairings9
Position of longest consecutive pairings19
Pairings in 3prime end6
PositionCDS
2D Structure