Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGGCATCTGCAGCTGTCAAG
((((((((((((.(((.(((.&)))..))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377291
GeneSymbolCOL9A1
Binding site215,238
Score0.923
Seed1
Au0.441
Energy-24.7
Binding len23
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure