Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCACTGCCAGCTGGGT
.(.(((((((((.(((((((.&))))))))))).))))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377311
GeneSymbolL3MBTL1
Binding site3660,3680
Score0.846
Seed0
Au0.368
Energy-20.9
Binding len20
Me-6.64
Phylopstem-0.21177707999999998
Phylopflank0.09213525374999998
Longest consecutive pairings11
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure