Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGAAGAAGGAGCTCCTGCAGGAGCAGCTGGAGCAGCTGCAGA
((((((((((((((((.....&.))))))...)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377312
GeneSymbolIKBKG
Binding site1135,1181
Score0.846
Seed1
Au0.412
Energy-24.1
Binding len21
Me-3.938
Phylopstem2.943265736842104
Phylopflank4.081478046499999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure