Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTCGGGGAGCTGCAGG
((((((((.(....((((((.&))))))....).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377314
GeneSymbolIKBKG
Binding site580,601
Score1.0
Seed1
Au0.368
Energy-23.1
Binding len21
Me-13.312
Phylopstem3.816945
Phylopflank2.63085619875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure