Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATTGCAGAGCGGCTGTG
..((((((((..(((((((((&))).)))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377376
GeneSymbolZSCAN20
Binding site1711,1731
Score0.846
Seed1
Au0.353
Energy-22.0
Binding len20
Me-11.129
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure