Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTAGGATCCCAGCTGCC
..(((((((.((((.(((((.&))))).)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377376
GeneSymbolZSCAN20
Binding site7242,7261
Score0.923
Seed1
Au0.397
Energy-22.2
Binding len19
Me-6.935
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure