Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGACCTCAGCAGCTGA
...(((((((((((..(((((&)))))))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377376
GeneSymbolZSCAN20
Binding site6760,6780
Score0.846
Seed0
Au0.515
Energy-20.5
Binding len20
Me-7.483
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure