Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACATGGATGCCAGT
..(((((((...((((((....&))))))..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001377415
GeneSymbolARHGEF3
Binding site1716,1732
Score0.846
Seed1
Au0.544
Energy-18.5
Binding len16
Me-12.371
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure