Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTCCAAGAAGAAGCATAAAAGTGGAATGGAGCCAGG
..((((((((.((((((((((.&))))))....................)))).)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001351494
GeneSymbolSLC8A1
Binding site3618,3658
Score0.846
Seed1
Au0.574
Energy-26.2
Binding len40
Me-7.782
Phylopstem-0.5415233183333334
Phylopflank0.0374378625
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure