Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCAGCAGCTGG
...(((((((((((((.....&)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377421
GeneSymbolHEMK1
Binding site9132,9147
Score0.923
Seed0
Au0.441
Energy-22.0
Binding len15
Me-6.515
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure