Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001377462
GeneSymbolCLCC1
Binding site3586,3609
Score1.0
Seed1
Au0.529
Energy-18.0
Binding len16
Me-8.406
Phylopstem-0.06391325000000006
Phylopflank0.7100866349999999
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure