Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTTTCACTATGTTGGCCAGGC
.((((((...((((((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001377463
GeneSymbolCLCC1
Binding site3601,3624
Score1.0
Seed1
Au0.529
Energy-18.0
Binding len16
Me-8.406
Phylopstem1.4190805000000002
Phylopflank1.1234961275000002
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure