Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATCTGGCTACCCCAATAGGAAGGCTGAAGGTTTCCCTTCAAGCAGCTGCT
..((((((((..(((.((((.&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001377523
GeneSymbolRPGRIP1
Binding site1807,1857
Score0.846
Seed1
Au0.515
Energy-21.3
Binding len17
Me-11.362
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure